Genome Meta Information: Peptostreptococcus anaerobius MJR8628A (GCA_001563595.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001563595.1 | ||
| HOMD Taxon-ID | HMT-0542 | ||
| Species Name (in use by HOMD) | Peptostreptococcus anaerobius | ||
| Organism Name (as deposited) | HMT-542 Peptostreptococcus anaerobius MJR8628A | ||
| Strain or Isolate | MJR8628A | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptostreptococcus; s__Peptostreptococcus anaerobius |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 103 | ||
| Contigs |
|
||
| Total Sequence Length | 2,023,341 (bp) | ||
| GC Percentage | 35.95 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/595/GCA_001563595.1_ASM156359v1 | ||
| CDS | 1809 | ||
| Genes | 1855 | ||
| mRNA | 1855 | ||
| misc RNA | 36 | ||
| rRNA | 2 | ||
| tRNA | 7 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.14 % | ||
| CheckM Completeness | 94.68 % | ||
| CheckM Contamination | 3.06 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM156359v1 |
| GenBank Assembly Accession | GCA_001563595.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001563595.1 [NCBI] |
| BioSample | SAMN03854410 [NCBI] |
| BioProject | PRJNA272087 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2015-07-10T14:05:16.603 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LSQZ01 |
| NCBI TaxID | 1261 |
| Isolation Source | vagina |
| Geo Location | |
