Genome Meta Information: Paenibacillus glucanolyticus SLM1 (GCA_001633025.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001633025.1 | ||
| HOMD Taxon-ID | HMT-0921 | ||
| Species Name (in use by HOMD) | Paenibacillus glucanolyticus | ||
| Organism Name (as deposited) | HMT-921 Paenibacillus glucanolyticus SLM1 | ||
| Strain or Isolate | SLM1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Paenibacillales;f__Paenibacillaceae;g__Paenibacillus; s__Paenibacillus glucanolyticus |
||
| Sequencing Technology | PacBio; Illumina MiSeq | ||
| Genome Coverage | 245 | ||
| Contigs |
|
||
| Total Sequence Length | 7,039,886 (bp) | ||
| GC Percentage | 48.08 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/025/GCA_001633025.1_ASM163302v1 | ||
| CDS | 6477 | ||
| Genes | 6579 | ||
| mRNA | 0 | ||
| misc RNA | 0 | ||
| rRNA | 24 | ||
| tRNA | 77 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.99 % | ||
| CheckM Completeness | 99.72 % | ||
| CheckM Contamination | 0.19 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM163302v1 |
| GenBank Assembly Accession | GCA_001633025.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001633025.1 [NCBI] |
| BioSample | SAMN04432833 [NCBI] |
| BioProject | PRJNA309413 [NCBI] |
| Submitter | North Carolina State University |
| Submission Date | 2016-01-21T12:46:08.000 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | LWMH01 |
| NCBI TaxID | 59843 |
| Isolation Source | black liquor from pulp mill stream |
| Geo Location | USA |
