Taxon Table | Genome Table
Genome Meta Information:
Methanobrevibacter
oralis
DSM 7256 (GCA_001639275.1)
| HOMD Genome-ID |
GCA_001639275.1
|
| HOMD Taxon-ID |
HMT-0815
|
| Species Name (in use by HOMD) |
Methanobrevibacter oralis
|
| Organism Name (as deposited) |
HMT-815 Methanobrevibacter oralis DSM 7256
|
| Strain or Isolate |
DSM 7256
|
GTDB (V226)
Taxonomy |
d__Archaea;p__Methanobacteriota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanocatella;
s__Methanocatella oralis |
| Sequencing Technology |
Illumina
|
| Genome Coverage |
179
|
| Contigs |
Number of Contigs: 136
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,140,433 (bp) |
| GC Percentage |
27.71
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/275/GCA_001639275.1_ASM163927v1
|
| CDS |
1994
|
| Genes |
2029
|
| mRNA |
2029
|
| misc RNA |
3
|
| rRNA |
2
|
| tRNA |
30
|
| tmRNA |
0
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
96.6 %
|
| CheckM Contamination |
2.11 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM163927v1
|
| GenBank Assembly Accession |
GCA_001639275.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_001639275.1
[NCBI]
|
| BioSample |
SAMN04867341
[NCBI]
|
| BioProject |
PRJNA318760
[NCBI]
|
| Submitter |
Goettingen Genomics Laboratory
|
| Submission Date |
2016-04-18T11:14:05.000
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
LWMU01
|
| NCBI TaxID |
66851
|
| Isolation Source |
oral cavity
|
| Geo Location |
not collected
|
