Genome Meta Information: Moraxella nonliquefaciens CCUG 348 (GCA_001679005.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001679005.1 | ||
| HOMD Taxon-ID | HMT-0098 | ||
| Species Name (in use by HOMD) | Moraxella nonliquefaciens | ||
| Organism Name (as deposited) | HMT-098 Moraxella nonliquefaciens CCUG 348 | ||
| Strain or Isolate | CCUG 348 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella; s__Moraxella nonliquefaciens |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 112 | ||
| Contigs |
|
||
| Total Sequence Length | 2,279,879 (bp) | ||
| GC Percentage | 42.0 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/005/GCA_001679005.1_ASM167900v1 | ||
| CDS | 2113 | ||
| Genes | 2168 | ||
| mRNA | 2168 | ||
| misc RNA | 8 | ||
| rRNA | 3 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 97.09 % | ||
| CheckM Contamination | 1.27 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM167900v1 |
| GenBank Assembly Accession | GCA_001679005.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001679005.1 [NCBI] |
| BioSample | SAMN04994741 [NCBI] |
| BioProject | PRJNA302716 [NCBI] |
| Submitter | TAILORED-Treatment project |
| Submission Date | 2016-05-13T03:16:02.000 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LXTW01 |
| NCBI TaxID | 478 |
| Isolation Source | nose swab |
| Geo Location | Norway: Oslo |
