Genome Meta Information: Moraxella nonliquefaciens CCUG 47514 (GCA_001679125.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001679125.1 | ||
| HOMD Taxon-ID | HMT-0098 | ||
| Species Name (in use by HOMD) | Moraxella nonliquefaciens | ||
| Organism Name (as deposited) | HMT-098 Moraxella nonliquefaciens CCUG 47514 | ||
| Strain or Isolate | CCUG 47514 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella; s__Moraxella nonliquefaciens |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 109 | ||
| Contigs |
|
||
| Total Sequence Length | 2,112,543 (bp) | ||
| GC Percentage | 42.37 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/125/GCA_001679125.1_ASM167912v1 | ||
| CDS | 1936 | ||
| Genes | 1989 | ||
| mRNA | 1989 | ||
| misc RNA | 8 | ||
| rRNA | 3 | ||
| tRNA | 41 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.22 % | ||
| CheckM Completeness | 97.48 % | ||
| CheckM Contamination | 0.86 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM167912v1 |
| GenBank Assembly Accession | GCA_001679125.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001679125.1 [NCBI] |
| BioSample | SAMN05214002 [NCBI] |
| BioProject | PRJNA302716 [NCBI] |
| Submitter | TAILORED-Treatment project |
| Submission Date | 2016-06-08T05:55:04.906 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LZDM01 |
| NCBI TaxID | 478 |
| Isolation Source | Human cornea |
| Geo Location | Sweden: Vastra Gotaland, Gothe |
