Genome Meta Information: Moraxella nonliquefaciens CCUG 60284 (GCA_001679155.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001679155.1 | ||
| HOMD Taxon-ID | HMT-0098 | ||
| Species Name (in use by HOMD) | Moraxella nonliquefaciens | ||
| Organism Name (as deposited) | HMT-098 Moraxella nonliquefaciens CCUG 60284 | ||
| Strain or Isolate | CCUG 60284 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella; s__Moraxella nonliquefaciens |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 164 | ||
| Contigs |
|
||
| Total Sequence Length | 2,194,559 (bp) | ||
| GC Percentage | 42.22 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/155/GCA_001679155.1_ASM167915v1 | ||
| CDS | 2024 | ||
| Genes | 2082 | ||
| mRNA | 2082 | ||
| misc RNA | 12 | ||
| rRNA | 3 | ||
| tRNA | 42 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.17 % | ||
| CheckM Completeness | 97.35 % | ||
| CheckM Contamination | 1.12 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM167915v1 |
| GenBank Assembly Accession | GCA_001679155.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001679155.1 [NCBI] |
| BioSample | SAMN05214262 [NCBI] |
| BioProject | PRJNA302716 [NCBI] |
| Submitter | TAILORED-Treatment project |
| Submission Date | 2016-06-08T06:14:04.590 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LZDN01 |
| NCBI TaxID | 478 |
| Isolation Source | Human cornea |
| Geo Location | Sweden: Vastra Gotaland, Gothe |
