Genome Meta Information: Moraxella osloensis CCUG 350 (GCA_001679175.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001679175.1 | ||
| HOMD Taxon-ID | HMT-0711 | ||
| Species Name (in use by HOMD) | Moraxella osloensis | ||
| Organism Name (as deposited) | HMT-711 Moraxella osloensis CCUG 350 | ||
| Strain or Isolate | CCUG 350 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella_A; s__Moraxella_A osloensis |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 201 | ||
| Contigs |
|
||
| Total Sequence Length | 2,594,948 (bp) | ||
| GC Percentage | 43.56 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/175/GCA_001679175.1_ASM167917v1 | ||
| CDS | 2270 | ||
| Genes | 2413 | ||
| mRNA | 2413 | ||
| misc RNA | 97 | ||
| rRNA | 4 | ||
| tRNA | 41 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.93 % | ||
| CheckM Completeness | 99.5 % | ||
| CheckM Contamination | 0.32 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM167917v1 |
| GenBank Assembly Accession | GCA_001679175.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001679175.1 [NCBI] |
| BioSample | SAMN05214315 [NCBI] |
| BioProject | PRJNA302716 [NCBI] |
| Submitter | TAILORED-Treatment project |
| Submission Date | 2016-06-08T07:37:02.930 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LZDO01 |
| NCBI TaxID | 34062 |
| Isolation Source | Human cerebrospinal fluid |
| Geo Location | USA |
