Genome Meta Information: Neisseria meningitidis DE10444 (GCA_001697125.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001697125.1 | ||
| HOMD Taxon-ID | HMT-0669 | ||
| Species Name (in use by HOMD) | Neisseria meningitidis | ||
| Organism Name (as deposited) | HMT-669 Neisseria meningitidis DE10444 | ||
| Strain or Isolate | DE10444 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria meningitidis |
||
| Sequencing Technology | 454; Illumina | ||
| Genome Coverage | 42 | ||
| Contigs |
|
||
| Total Sequence Length | 2,170,619 (bp) | ||
| GC Percentage | 51.63 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/125/GCA_001697125.1_ASM169712v1 | ||
| CDS | 2014 | ||
| Genes | 2126 | ||
| mRNA | 2126 | ||
| misc RNA | 40 | ||
| rRNA | 12 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.4 % | ||
| CheckM Completeness | 98.85 % | ||
| CheckM Contamination | 0.39 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM169712v1 |
| GenBank Assembly Accession | GCA_001697125.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001697125.1 [NCBI] |
| BioSample | SAMN03944748 [NCBI] |
| BioProject | PRJNA291329 [NCBI] |
| Submitter | JLU |
| Submission Date | 2015-07-30T04:19:27.997 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 487 |
| Isolation Source | nasopharynx |
| Geo Location | Germany |
