Genome Meta Information: Dialister pneumosintes F0677 (GCA_001717505.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001717505.1 | ||
| HOMD Taxon-ID | HMT-0736 | ||
| Species Name (in use by HOMD) | Dialister pneumosintes | ||
| Organism Name (as deposited) | HMT-736 Dialister pneumosintes F0677 | ||
| Strain or Isolate | F0677 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Dialisteraceae;g__Allisonella; s__Allisonella pneumosinta |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 230 | ||
| Contigs |
|
||
| Total Sequence Length | 1,274,073 (bp) | ||
| GC Percentage | 35.19 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/505/GCA_001717505.1_ASM171750v1 | ||
| CDS | 1198 | ||
| Genes | 1285 | ||
| mRNA | 1285 | ||
| misc RNA | 17 | ||
| rRNA | 16 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 91.78 % | ||
| CheckM Contamination | 1.87 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM171750v1 |
| GenBank Assembly Accession | GCA_001717505.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001717505.1 [NCBI] |
| BioSample | SAMN05413926 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2016-07-18T13:01:08.233 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 39950 |
| Isolation Source | Supragingival dental plaque |
| Geo Location | USA: Boston, MA |
