Genome Meta Information: Burkholderia cepacia MSMB1184WGS (GCA_001718835.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001718835.1 | ||
| HOMD Taxon-ID | HMT-0571 | ||
| Species Name (in use by HOMD) | Burkholderia cepacia | ||
| Organism Name (as deposited) | HMT-571 Burkholderia cepacia MSMB1184WGS | ||
| Strain or Isolate | MSMB1184WGS | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia; s__Burkholderia cepacia_F |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 50 | ||
| Contigs |
|
||
| Total Sequence Length | 8,003,631 (bp) | ||
| GC Percentage | 66.39 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/835/GCA_001718835.1_ASM171883v1 | ||
| CDS | 7040 | ||
| Genes | 7199 | ||
| mRNA | 7199 | ||
| misc RNA | 64 | ||
| rRNA | 18 | ||
| tRNA | 76 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.97 % | ||
| CheckM Completeness | 94.42 % | ||
| CheckM Contamination | 4.35 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM171883v1 |
| GenBank Assembly Accession | GCA_001718835.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001718835.1 [NCBI] |
| BioSample | SAMN03449447 [NCBI] |
| BioProject | PRJNA279182 [NCBI] |
| Submitter | Northern Arizona University |
| Submission Date | 2015-03-26T20:14:37.787 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 292 |
| Isolation Source | soil |
| Geo Location | Australia: Northern Territory |
