Genome Meta Information: Neisseria elongata HMSC31F04 (GCA_001807735.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001807735.1 | ||
| HOMD Taxon-ID | HMT-0598 | ||
| Species Name (in use by HOMD) | Neisseria elongata | ||
| Organism Name (as deposited) | HMT-598 Neisseria elongata HMSC31F04 | ||
| Strain or Isolate | HMSC31F04 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria elongata |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 220 | ||
| Contigs |
|
||
| Total Sequence Length | 2,257,660 (bp) | ||
| GC Percentage | 54.23 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/735/GCA_001807735.1_ASM180773v1 | ||
| CDS | 2172 | ||
| Genes | 2234 | ||
| mRNA | 2234 | ||
| misc RNA | 14 | ||
| rRNA | 3 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.1 % | ||
| CheckM Contamination | 1.1 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM180773v1 |
| GenBank Assembly Accession | GCA_001807735.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001807735.1 [NCBI] |
| BioSample | SAMN03436258 [NCBI] |
| BioProject | PRJNA269844 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2015-03-20T19:05:06.983 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LWNI01 |
| NCBI TaxID | 1581075 |
| Isolation Source | Respiratory |
| Geo Location | |
