Genome Meta Information: Peptoniphilus grossensis HMSC062D09 (GCA_001811425.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001811425.1 | ||
| HOMD Taxon-ID | HMT-0187 | ||
| Species Name (in use by HOMD) | Peptoniphilus grossensis | ||
| Organism Name (as deposited) | HMT-187 Peptoniphilus grossensis HMSC062D09 | ||
| Strain or Isolate | HMSC062D09 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus_A; s__Peptoniphilus_A grossensis |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 147 | ||
| Contigs |
|
||
| Total Sequence Length | 1,883,002 (bp) | ||
| GC Percentage | 34.19 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/425/GCA_001811425.1_ASM181142v1 | ||
| CDS | 1730 | ||
| Genes | 1803 | ||
| mRNA | 1803 | ||
| misc RNA | 32 | ||
| rRNA | 4 | ||
| tRNA | 36 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 96.75 % | ||
| CheckM Contamination | 2.02 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM181142v1 |
| GenBank Assembly Accession | GCA_001811425.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001811425.1 [NCBI] |
| BioSample | SAMN04477619 [NCBI] |
| BioProject | PRJNA299955 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2016-02-06T08:06:02.280 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LTGC01 |
| NCBI TaxID | 1739305 |
| Isolation Source | wound perineum |
| Geo Location | |
