Genome Meta Information: Schaalia meyeri HMSC062G12 (GCA_001813985.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001813985.1 | ||
| HOMD Taxon-ID | HMT-0671 | ||
| Species Name (in use by HOMD) | Schaalia meyeri | ||
| Organism Name (as deposited) | HMT-671 Schaalia meyeri HMSC062G12 | ||
| Strain or Isolate | HMSC062G12 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Pauljensenia; s__Pauljensenia meyeri |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 139 | ||
| Contigs |
|
||
| Total Sequence Length | 2,085,934 (bp) | ||
| GC Percentage | 65.59 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/985/GCA_001813985.1_ASM181398v1 | ||
| CDS | 1813 | ||
| Genes | 1871 | ||
| mRNA | 1871 | ||
| misc RNA | 6 | ||
| rRNA | 3 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 96.77 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM181398v1 |
| GenBank Assembly Accession | GCA_001813985.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001813985.1 [NCBI] |
| BioSample | SAMN04480372 [NCBI] |
| BioProject | PRJNA300100 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2016-02-08T13:05:24.550 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LTVP01 |
| NCBI TaxID | 1739450 |
| Isolation Source | abscess l neck |
| Geo Location | |
