Genome Meta Information: Segatella oris HMSC077E09 (GCA_001814685.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001814685.1 | ||
| HOMD Taxon-ID | HMT-0311 | ||
| Species Name (in use by HOMD) | Segatella oris | ||
| Organism Name (as deposited) | HMT-311 Segatella oris HMSC077E09 | ||
| Strain or Isolate | HMSC077E09 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella oris |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 101 | ||
| Contigs |
|
||
| Total Sequence Length | 3,134,095 (bp) | ||
| GC Percentage | 44.33 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/685/GCA_001814685.1_ASM181468v1 | ||
| CDS | 2645 | ||
| Genes | 2714 | ||
| mRNA | 2714 | ||
| misc RNA | 11 | ||
| rRNA | 5 | ||
| tRNA | 51 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.29 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM181468v1 |
| GenBank Assembly Accession | GCA_001814685.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001814685.1 [NCBI] |
| BioSample | SAMN04480455 [NCBI] |
| BioProject | PRJNA300137 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2016-02-08T13:05:27.457 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LTUI01 |
| NCBI TaxID | 1739487 |
| Isolation Source | blood l hand |
| Geo Location | |
