Genome Meta Information: Klebsiella pneumoniae CAV1217 (GCA_001908715.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001908715.1 | ||
| HOMD Taxon-ID | HMT-0731 | ||
| Species Name (in use by HOMD) | Klebsiella pneumoniae | ||
| Organism Name (as deposited) | HMT-731 Klebsiella pneumoniae CAV1217 | ||
| Strain or Isolate | CAV1217 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella; s__Klebsiella pneumoniae |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 200 | ||
| Contigs |
|
||
| Total Sequence Length | 5,379,063 (bp) | ||
| GC Percentage | 57.11 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/715/GCA_001908715.1_ASM190871v1 | ||
| CDS | 5105 | ||
| Genes | 5361 | ||
| mRNA | 5361 | ||
| misc RNA | 144 | ||
| rRNA | 25 | ||
| tRNA | 86 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.81 % | ||
| CheckM Completeness | 94.72 % | ||
| CheckM Contamination | 0.45 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM190871v1 |
| GenBank Assembly Accession | GCA_001908715.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001908715.1 [NCBI] |
| BioSample | SAMN03024585 [NCBI] |
| BioProject | PRJNA246471 [NCBI] |
| Submitter | University of Oxford |
| Submission Date | 2014-09-10T05:02:51.973 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 573 |
| Isolation Source | urine |
| Geo Location | USA:Virginia |
