Genome Meta Information: Actinomyces naeslundii T23P-1 (GCA_001956475.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001956475.1 | ||
| HOMD Taxon-ID | HMT-0176 | ||
| Species Name (in use by HOMD) | Actinomyces naeslundii | ||
| Organism Name (as deposited) | HMT-176 Actinomyces naeslundii T23P-1 | ||
| Strain or Isolate | T23P-1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces naeslundii |
||
| Sequencing Technology | Illumina GAIIx; 454 | ||
| Genome Coverage | 12 | ||
| Contigs |
|
||
| Total Sequence Length | 3,068,220 (bp) | ||
| GC Percentage | 68.01 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/475/GCA_001956475.1_ASM195647v1 | ||
| CDS | 2551 | ||
| Genes | 2613 | ||
| mRNA | 2613 | ||
| misc RNA | 14 | ||
| rRNA | 1 | ||
| tRNA | 47 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | 98.06 % | ||
| CheckM Completeness | 94.46 % | ||
| CheckM Contamination | 3.97 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM195647v1 |
| GenBank Assembly Accession | GCA_001956475.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001956475.1 [NCBI] |
| BioSample | SAMN05898706 [NCBI] |
| BioProject | PRJNA347929 [NCBI] |
| Submitter | Kings College London |
| Submission Date | 2016-10-12T09:54:05.490 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | MSRM01 |
| NCBI TaxID | 1655 |
| Isolation Source | Plaque (carries -) |
| Geo Location | United Kingdom: London |
