Genome Meta Information: Neisseria meningitidis 38277 (GCA_001974965.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001974965.1 | ||
| HOMD Taxon-ID | HMT-0669 | ||
| Species Name (in use by HOMD) | Neisseria meningitidis | ||
| Organism Name (as deposited) | HMT-669 Neisseria meningitidis 38277 | ||
| Strain or Isolate | 38277 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria meningitidis |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 202 | ||
| Contigs |
|
||
| Total Sequence Length | 2,264,278 (bp) | ||
| GC Percentage | 51.4 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/965/GCA_001974965.1_ASM197496v1 | ||
| CDS | 2123 | ||
| Genes | 2217 | ||
| mRNA | 2217 | ||
| misc RNA | 20 | ||
| rRNA | 12 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.32 % | ||
| CheckM Completeness | 98.52 % | ||
| CheckM Contamination | 0.43 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM197496v1 |
| GenBank Assembly Accession | GCA_001974965.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001974965.1 [NCBI] |
| BioSample | SAMN04321475 [NCBI] |
| BioProject | PRJNA305279 [NCBI] |
| Submitter | Public Health Agency of Canada |
| Submission Date | 2015-12-07T12:26:03.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 487 |
| Isolation Source | throat |
| Geo Location | Canada |
