Genome Meta Information: Neisseria meningitidis FDAARGOS_214 (GCA_002073235.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002073235.2 | ||
| HOMD Taxon-ID | HMT-0669 | ||
| Species Name (in use by HOMD) | Neisseria meningitidis | ||
| Organism Name (as deposited) | HMT-669 Neisseria meningitidis FDAARGOS_214 | ||
| Strain or Isolate | FDAARGOS_214 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria meningitidis |
||
| Sequencing Technology | PacBio; Illumina | ||
| Genome Coverage | 712.264 | ||
| Contigs |
|
||
| Total Sequence Length | 2,397,461 (bp) | ||
| GC Percentage | 51.05 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/235/GCA_002073235.2_ASM207323v2 | ||
| CDS | 2253 | ||
| Genes | 2374 | ||
| mRNA | 2374 | ||
| misc RNA | 48 | ||
| rRNA | 12 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.4 % | ||
| CheckM Completeness | 99.21 % | ||
| CheckM Contamination | 0.88 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM207323v2 |
| GenBank Assembly Accession | GCA_002073235.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002073235.2 [NCBI] |
| BioSample | SAMN04875551 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center |
| Submission Date | 2016-04-20T14:41:09.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 487 |
| Isolation Source | spinal fluid |
| Geo Location | USA:MD |
