Genome Meta Information: Neisseria meningitidis FDAARGOS_209 (GCA_002073575.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002073575.2 | ||
| HOMD Taxon-ID | HMT-0669 | ||
| Species Name (in use by HOMD) | Neisseria meningitidis | ||
| Organism Name (as deposited) | HMT-669 Neisseria meningitidis FDAARGOS_209 | ||
| Strain or Isolate | FDAARGOS_209 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria meningitidis |
||
| Sequencing Technology | PacBio; Illumina | ||
| Genome Coverage | 640.637 | ||
| Contigs |
|
||
| Total Sequence Length | 2,181,232 (bp) | ||
| GC Percentage | 51.89 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/575/GCA_002073575.2_ASM207357v2 | ||
| CDS | 2045 | ||
| Genes | 2155 | ||
| mRNA | 2155 | ||
| misc RNA | 37 | ||
| rRNA | 12 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.91 % | ||
| CheckM Completeness | 98.17 % | ||
| CheckM Contamination | 0.15 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM207357v2 |
| GenBank Assembly Accession | GCA_002073575.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002073575.2 [NCBI] |
| BioSample | SAMN04875546 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center |
| Submission Date | 2016-04-20T14:41:08.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 487 |
| Isolation Source | human |
| Geo Location | United Kingdom |
