Genome Meta Information: Paracoccus yeei FDAARGOS_252 (GCA_002073635.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002073635.2 | ||
| HOMD Taxon-ID | HMT-0104 | ||
| Species Name (in use by HOMD) | Paracoccus yeei | ||
| Organism Name (as deposited) | HMT-104 Paracoccus yeei FDAARGOS_252 | ||
| Strain or Isolate | FDAARGOS_252 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus; s__Paracoccus yeei |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 444.767 | ||
| Contigs |
|
||
| Total Sequence Length | 4,829,607 (bp) | ||
| GC Percentage | 67.06 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/635/GCA_002073635.2_ASM207363v2 | ||
| CDS | 4644 | ||
| Genes | 4740 | ||
| mRNA | 4740 | ||
| misc RNA | 25 | ||
| rRNA | 9 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.46 % | ||
| CheckM Completeness | 99.31 % | ||
| CheckM Contamination | 1.13 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM207363v2 |
| GenBank Assembly Accession | GCA_002073635.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002073635.2 [NCBI] |
| BioSample | SAMN04875578 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center |
| Submission Date | 2016-04-20T14:41:11.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 147645 |
| Isolation Source | Urine suprapubic aspirate |
| Geo Location | USA:DC |
