Genome Meta Information: Neisseria mucosa FDAARGOS_260 (GCA_002073715.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002073715.2 | ||
| HOMD Taxon-ID | HMT-0682 | ||
| Species Name (in use by HOMD) | Neisseria mucosa | ||
| Organism Name (as deposited) | HMT-682 Neisseria mucosa FDAARGOS_260 | ||
| Strain or Isolate | FDAARGOS_260 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria mucosa |
||
| Sequencing Technology | PacBio; Illumina | ||
| Genome Coverage | 601.744 | ||
| Contigs |
|
||
| Total Sequence Length | 2,783,943 (bp) | ||
| GC Percentage | 50.95 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/715/GCA_002073715.2_ASM207371v2 | ||
| CDS | 2543 | ||
| Genes | 2636 | ||
| mRNA | 2636 | ||
| misc RNA | 20 | ||
| rRNA | 12 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.93 % | ||
| CheckM Completeness | 99.83 % | ||
| CheckM Contamination | 1.1 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM207371v2 |
| GenBank Assembly Accession | GCA_002073715.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002073715.2 [NCBI] |
| BioSample | SAMN04875586 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center |
| Submission Date | 2016-04-20T14:41:12.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 488 |
| Isolation Source | blood |
| Geo Location | USA:DC |
