Genome Meta Information: Mycoplasmoides pneumoniae S63-tet-R (GCA_002090215.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002090215.1 | ||
| HOMD Taxon-ID | HMT-0732 | ||
| Species Name (in use by HOMD) | Mycoplasmoides pneumoniae | ||
| Organism Name (as deposited) | HMT-732 Mycoplasmoides pneumoniae S63-tet-R | ||
| Strain or Isolate | S63-tet-R | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Mycoplasmatales;f__Mycoplasmoidaceae;g__Mycoplasmoides; s__Mycoplasmoides pneumoniae |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 40 | ||
| Contigs |
|
||
| Total Sequence Length | 816,435 (bp) | ||
| GC Percentage | 40.01 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/215/GCA_002090215.1_ASM209021v1 | ||
| CDS | 1395 | ||
| Genes | 1438 | ||
| mRNA | 1438 | ||
| misc RNA | 2 | ||
| rRNA | 3 | ||
| tRNA | 37 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.75 % | ||
| CheckM Completeness | 98.43 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM209021v1 |
| GenBank Assembly Accession | GCA_002090215.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002090215.1 [NCBI] |
| BioSample | SAMN06699082 [NCBI] |
| BioProject | PRJNA382063 [NCBI] |
| Submitter | Affiliated Hospital of Academy of Military Medical Science |
| Submission Date | 2017-04-07T05:02:05.460 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 2104 |
| Isolation Source | throat swab |
| Geo Location | China: Beijing |
