Taxon Table | Genome Table
Genome Meta Information:
Paracoccus
yeei
G1212 (GCA_002196965.1)
| HOMD Genome-ID |
GCA_002196965.1
|
| HOMD Taxon-ID |
HMT-0104
|
| Species Name (in use by HOMD) |
Paracoccus yeei
|
| Organism Name (as deposited) |
HMT-104 Paracoccus yeei G1212
|
| Strain or Isolate |
G1212
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;
s__Paracoccus yeei |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
150
|
| Contigs |
Number of Contigs: 199
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
4,399,776 (bp) |
| GC Percentage |
67.43
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/965/GCA_002196965.1_ASM219696v1
|
| CDS |
4148
|
| Genes |
4230
|
| mRNA |
4230
|
| misc RNA |
24
|
| rRNA |
3
|
| tRNA |
54
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
99.99 %
|
| CheckM Completeness |
99.54 %
|
| CheckM Contamination |
0.74 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM219696v1
|
| GenBank Assembly Accession |
GCA_002196965.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_002196965.1
[NCBI]
|
| BioSample |
SAMN04280276
[NCBI]
|
| BioProject |
PRJNA302807
[NCBI]
|
| Submitter |
CDC
|
| Submission Date |
2015-11-19T16:42:20.000
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
NIPZ01
|
| NCBI TaxID |
147645
|
| Isolation Source |
|
| Geo Location |
USA: Pennsylvania
|
