Genome Meta Information: Brevundimonas diminuta BZC3 (GCA_002205555.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002205555.1 | ||
| HOMD Taxon-ID | HMT-0590 | ||
| Species Name (in use by HOMD) | Brevundimonas diminuta | ||
| Organism Name (as deposited) | HMT-590 Brevundimonas diminuta BZC3 | ||
| Strain or Isolate | BZC3 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas; s__Brevundimonas diminuta |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 296.25 | ||
| Contigs |
|
||
| Total Sequence Length | 3,385,620 (bp) | ||
| GC Percentage | 67.38 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/555/GCA_002205555.1_ASM220555v1 | ||
| CDS | 3216 | ||
| Genes | 3292 | ||
| mRNA | 3292 | ||
| misc RNA | 16 | ||
| rRNA | 6 | ||
| tRNA | 54 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | 97.52 % | ||
| CheckM Completeness | 98.97 % | ||
| CheckM Contamination | 3.25 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM220555v1 |
| GenBank Assembly Accession | GCA_002205555.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002205555.1 [NCBI] |
| BioSample | SAMN07236578 [NCBI] |
| BioProject | PRJNA390478 [NCBI] |
| Submitter | CAAS |
| Submission Date | 2017-06-14T05:46:04.890 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 293 |
| Isolation Source | gentamicin fermentation residue |
| Geo Location | China: Shandong |
