Genome Meta Information: Mobiluncus mulieris FDAARGOS_303 (GCA_002206485.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002206485.2 | ||
| HOMD Taxon-ID | HMT-0830 | ||
| Species Name (in use by HOMD) | Mobiluncus mulieris | ||
| Organism Name (as deposited) | HMT-830 Mobiluncus mulieris FDAARGOS_303 | ||
| Strain or Isolate | FDAARGOS_303 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Mobiluncus; s__Mobiluncus mulieris |
||
| Sequencing Technology | PacBio; Illumina | ||
| Genome Coverage | 586 | ||
| Contigs |
|
||
| Total Sequence Length | 2,662,734 (bp) | ||
| GC Percentage | 55.16 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/485/GCA_002206485.2_ASM220648v2 | ||
| CDS | 2434 | ||
| Genes | 2499 | ||
| mRNA | 2499 | ||
| misc RNA | 6 | ||
| rRNA | 6 | ||
| tRNA | 51 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 99.04 % | ||
| CheckM Completeness | 95.91 % | ||
| CheckM Contamination | 7.47 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM220648v2 |
| GenBank Assembly Accession | GCA_002206485.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002206485.1 [NCBI] |
| BioSample | SAMN06173316 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center |
| Submission Date | 2016-12-21T16:19:28.490 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | NJFD02 |
| NCBI TaxID | 2052 |
| Isolation Source | vaginal secretion from patient in Seattle, WA |
| Geo Location | USA:VA |
