Genome Meta Information: Campylobacter sputorum LMG 17589 (GCA_002220755.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002220755.1 | ||
| HOMD Taxon-ID | HMT-0776 | ||
| Species Name (in use by HOMD) | Campylobacter sputorum | ||
| Organism Name (as deposited) | HMT-776 Campylobacter sputorum LMG 17589 | ||
| Strain or Isolate | LMG 17589 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_F; s__Campylobacter_F sputorum |
||
| Sequencing Technology | Sanger dideoxy sequencing; 454; Illumina; PacBio | ||
| Genome Coverage | 1802 | ||
| Contigs |
|
||
| Total Sequence Length | 1,725,016 (bp) | ||
| GC Percentage | 29.63 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/755/GCA_002220755.1_ASM222075v1 | ||
| CDS | 1728 | ||
| Genes | 1787 | ||
| mRNA | 1787 | ||
| misc RNA | 5 | ||
| rRNA | 6 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.9 % | ||
| CheckM Completeness | 99.04 % | ||
| CheckM Contamination | 0.73 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM222075v1 |
| GenBank Assembly Accession | GCA_002220755.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002220755.1 [NCBI] |
| BioSample | SAMN03737990 [NCBI] |
| BioProject | PRJNA66807 [NCBI] |
| Submitter | USDA, ARS, WRRC |
| Submission Date | 2015-05-27T17:03:40.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1032066 |
| Isolation Source | Human, fecal |
| Geo Location | Canada: Ottawa |
