Genome Meta Information: Campylobacter sputorum RM8705 (GCA_002220775.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002220775.1 | ||
| HOMD Taxon-ID | HMT-0776 | ||
| Species Name (in use by HOMD) | Campylobacter sputorum | ||
| Organism Name (as deposited) | HMT-776 Campylobacter sputorum RM8705 | ||
| Strain or Isolate | RM8705 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_F; s__Campylobacter_F sputorum_B |
||
| Sequencing Technology | Sanger dideoxy sequencing; 454; Illumina; PacBio | ||
| Genome Coverage | 1983 | ||
| Contigs |
|
||
| Total Sequence Length | 1,681,311 (bp) | ||
| GC Percentage | 29.26 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/775/GCA_002220775.1_ASM222077v1 | ||
| CDS | 1670 | ||
| Genes | 1729 | ||
| mRNA | 1729 | ||
| misc RNA | 6 | ||
| rRNA | 6 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.71 % | ||
| CheckM Completeness | 99.08 % | ||
| CheckM Contamination | 0.25 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM222077v1 |
| GenBank Assembly Accession | GCA_002220775.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002220775.1 [NCBI] |
| BioSample | SAMN03737992 [NCBI] |
| BioProject | PRJNA284989 [NCBI] |
| Submitter | USDA, ARS, WRRC |
| Submission Date | 2015-05-27T17:03:40.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1660072 |
| Isolation Source | Cow, fecal |
| Geo Location | USA: California |
