Genome Meta Information: Neisseria sp. HMT-020 KEM232 (GCA_002237445.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002237445.1 | ||
| HOMD Taxon-ID | HMT-0020 | ||
| Species Name (in use by HOMD) | Neisseria sp. HMT-020 | ||
| Organism Name (as deposited) | HMT-020 Neisseria sp. HMT-020 KEM232 | ||
| Strain or Isolate | KEM232 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria sp002237445 |
||
| Sequencing Technology | Illumina_MiSeq_300_PE | ||
| Genome Coverage | 676.01 | ||
| Contigs |
|
||
| Total Sequence Length | 2,371,912 (bp) | ||
| GC Percentage | 58.52 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/445/GCA_002237445.1_ASM223744v1 | ||
| CDS | 2247 | ||
| Genes | 2312 | ||
| mRNA | 2312 | ||
| misc RNA | 15 | ||
| rRNA | 3 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.12 % | ||
| CheckM Contamination | 1.4 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM223744v1 |
| GenBank Assembly Accession | GCA_002237445.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002237445.1 [NCBI] |
| BioSample | SAMN07357172 [NCBI] |
| BioProject | PRJNA394664 [NCBI] |
| Submitter | Gwangju Health University |
| Submission Date | 2017-07-17T08:02:02.160 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 655307 |
| Isolation Source | smooth surface caries of tooth |
| Geo Location | South Korea: Gwangju |
