Genome Meta Information: Klebsiella pneumoniae KPCTRSRTH07 (GCA_002248115.3)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002248115.3 | ||
| HOMD Taxon-ID | HMT-0731 | ||
| Species Name (in use by HOMD) | Klebsiella pneumoniae | ||
| Organism Name (as deposited) | HMT-731 Klebsiella pneumoniae KPCTRSRTH07 | ||
| Strain or Isolate | KPCTRSRTH07 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella; s__Klebsiella pneumoniae |
||
| Sequencing Technology | Illumina NextSeq 500, Oxford Nanopore MinION | ||
| Genome Coverage | 161.03 | ||
| Contigs |
|
||
| Total Sequence Length | 5,827,024 (bp) | ||
| GC Percentage | 56.88 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/115/GCA_002248115.3_ASM224811v3 | ||
| CDS | 5510 | ||
| Genes | 5771 | ||
| mRNA | 5771 | ||
| misc RNA | 146 | ||
| rRNA | 25 | ||
| tRNA | 89 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.21 % | ||
| CheckM Completeness | 98.46 % | ||
| CheckM Contamination | 1.44 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM224811v3 |
| GenBank Assembly Accession | GCA_002248115.3 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002248115.2 [NCBI] |
| BioSample | SAMN07450602 [NCBI] |
| BioProject | PRJNA389557 [NCBI] |
| Submitter | JCVI |
| Submission Date | 2017-08-04T11:41:07.026 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 72407 |
| Isolation Source | Rectal swab |
| Geo Location | Thailand: Nakhon Pathom |
