Genome Meta Information: Brucella anthropi LUP21 (GCA_002252535.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002252535.1 | ||
| HOMD Taxon-ID | HMT-0544 | ||
| Species Name (in use by HOMD) | Brucella anthropi | ||
| Organism Name (as deposited) | HMT-544 Brucella anthropi LUP21 | ||
| Strain or Isolate | LUP21 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Brucella; s__Brucella anthropi |
||
| Sequencing Technology | Illumina HiSeq2500 | ||
| Genome Coverage | 72.57 | ||
| Contigs |
|
||
| Total Sequence Length | 5,582,813 (bp) | ||
| GC Percentage | 56.35 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/535/GCA_002252535.1_ASM225253v1 | ||
| CDS | 5354 | ||
| Genes | 5475 | ||
| mRNA | 5475 | ||
| misc RNA | 69 | ||
| rRNA | 2 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 93.06 % | ||
| CheckM Contamination | 33.95 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM225253v1 |
| GenBank Assembly Accession | GCA_002252535.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002252535.1 [NCBI] |
| BioSample | SAMN07259926 [NCBI] |
| BioProject | PRJNA391246 [NCBI] |
| Submitter | Intercollegiate Faculty of Biotechnology UG&MUG |
| Submission Date | 2017-06-21T07:39:03.590 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | NNRN01 |
| NCBI TaxID | 255457 |
| Isolation Source | Nodules of Lupinus honoratus |
| Geo Location | Argentina |
