Genome Meta Information: Corynebacterium gottingense NBT06-6 (GCA_002273005.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002273005.1 | ||
| HOMD Taxon-ID | HMT-0207 | ||
| Species Name (in use by HOMD) | Corynebacterium gottingense | ||
| Organism Name (as deposited) | HMT-207 Corynebacterium gottingense NBT06-6 | ||
| Strain or Isolate | NBT06-6 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium gottingense |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 521 | ||
| Contigs |
|
||
| Total Sequence Length | 2,689,254 (bp) | ||
| GC Percentage | 65.14 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/005/GCA_002273005.1_ASM227300v1 | ||
| CDS | 2429 | ||
| Genes | 2494 | ||
| mRNA | 2494 | ||
| misc RNA | 9 | ||
| rRNA | 3 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.82 % | ||
| CheckM Contamination | 0.87 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM227300v1 |
| GenBank Assembly Accession | GCA_002273005.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002273005.1 [NCBI] |
| BioSample | SAMN07460149 [NCBI] |
| BioProject | PRJNA396693 [NCBI] |
| Submitter | Shanghai Ocean University |
| Submission Date | 2017-08-08T05:40:03.313 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | NQMQ01 |
| NCBI TaxID | 2026255 |
| Isolation Source | Deep Sea Water |
| Geo Location | Papua New Guinea |
