Genome Meta Information: Corynebacterium gottingense NML 120412 (GCA_002285155.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002285155.1 | ||
| HOMD Taxon-ID | HMT-0207 | ||
| Species Name (in use by HOMD) | Corynebacterium gottingense | ||
| Organism Name (as deposited) | HMT-207 Corynebacterium gottingense NML 120412 | ||
| Strain or Isolate | NML 120412 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium gottingense |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 32 | ||
| Contigs |
|
||
| Total Sequence Length | 2,597,765 (bp) | ||
| GC Percentage | 65.53 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/155/GCA_002285155.1_ASM228515v1 | ||
| CDS | 2320 | ||
| Genes | 2401 | ||
| mRNA | 2401 | ||
| misc RNA | 10 | ||
| rRNA | 12 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.23 % | ||
| CheckM Contamination | 0.87 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM228515v1 |
| GenBank Assembly Accession | GCA_002285155.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002285155.1 [NCBI] |
| BioSample | SAMN07539811 [NCBI] |
| BioProject | PRJNA399534 [NCBI] |
| Submitter | National Microbiology Laboratory/ Public Health Agency of Canada |
| Submission Date | 2017-08-22T17:45:05.813 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | NSGL01 |
| NCBI TaxID | 2029401 |
| Isolation Source | blood |
| Geo Location | Canada: British Columbia |
