Genome Meta Information: Proteus mirabilis T21 (GCA_002310875.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002310875.1 | ||
| HOMD Taxon-ID | HMT-0676 | ||
| Species Name (in use by HOMD) | Proteus mirabilis | ||
| Organism Name (as deposited) | HMT-676 Proteus mirabilis T21 | ||
| Strain or Isolate | T21 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Proteus; s__Proteus mirabilis |
||
| Sequencing Technology | Pacbio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 4,286,593 (bp) | ||
| GC Percentage | 39.68 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/875/GCA_002310875.1_ASM231087v1 | ||
| CDS | 3965 | ||
| Genes | 4154 | ||
| mRNA | 4154 | ||
| misc RNA | 82 | ||
| rRNA | 22 | ||
| tRNA | 84 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.33 % | ||
| CheckM Completeness | 96.83 % | ||
| CheckM Contamination | 6.38 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM231087v1 |
| GenBank Assembly Accession | GCA_002310875.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002310875.1 [NCBI] |
| BioSample | SAMN05715221 [NCBI] |
| BioProject | PRJNA340922 [NCBI] |
| Submitter | Zhejiang University |
| Submission Date | 2016-08-29T22:19:06.883 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 584 |
| Isolation Source | sputum |
| Geo Location | China: Zhejiang |
