Genome Meta Information: Staphylococcus capitis TW2795 (GCA_002356175.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002356175.1 | ||
| HOMD Taxon-ID | HMT-0116 | ||
| Species Name (in use by HOMD) | Staphylococcus capitis | ||
| Organism Name (as deposited) | HMT-116 Staphylococcus capitis TW2795 | ||
| Strain or Isolate | TW2795 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus capitis |
||
| Sequencing Technology | 454 GS FLX;ABI 3730 | ||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,486,776 (bp) | ||
| GC Percentage | 33.05 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/175/GCA_002356175.1_ASM235617v1 | ||
| CDS | 2360 | ||
| Genes | 2486 | ||
| mRNA | 2486 | ||
| misc RNA | 48 | ||
| rRNA | 16 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99 % | ||
| CheckM Completeness | 98.88 % | ||
| CheckM Contamination | 0.28 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM235617v1 |
| GenBank Assembly Accession | GCA_002356175.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002356175.1 [NCBI] |
| BioSample | SAMD00041516 [NCBI] |
| BioProject | PRJDB4225 [NCBI] |
| Submitter | Department of Bacteriology, Jichi medical University |
| Submission Date | 2017-02-03T01:00:33.543 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 29388 |
| Isolation Source | |
| Geo Location | Japan:Tokyo |
