Genome Meta Information: Lactococcus lactis ATCC 19435 (GCA_002441815.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002441815.1 | ||
| HOMD Taxon-ID | HMT-0804 | ||
| Species Name (in use by HOMD) | Lactococcus lactis | ||
| Organism Name (as deposited) | HMT-804 Lactococcus lactis ATCC 19435 | ||
| Strain or Isolate | ATCC 19435 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus; s__Lactococcus lactis |
||
| Sequencing Technology | Illumina MiSeq; Illumina HiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,463,410 (bp) | ||
| GC Percentage | 35.23 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/441/815/GCA_002441815.1_ASM244181v1 | ||
| CDS | 2434 | ||
| Genes | 2519 | ||
| mRNA | 2519 | ||
| misc RNA | 41 | ||
| rRNA | 4 | ||
| tRNA | 39 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 96.58 % | ||
| CheckM Contamination | 0.98 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM244181v1 |
| GenBank Assembly Accession | GCA_002441815.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002441815.1 [NCBI] |
| BioSample | SAMN03267157 [NCBI] |
| BioProject | PRJNA270383 [NCBI] |
| Submitter | Inner Mongolia Agricultural University |
| Submission Date | 2014-12-16T21:15:39.863 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JXKB01 |
| NCBI TaxID | 1360 |
| Isolation Source | missing |
| Geo Location | missing |
