Genome Meta Information: Microbacterium ginsengisoli IN25 (GCA_002694325.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002694325.1 | ||
| HOMD Taxon-ID | HMT-0185 | ||
| Species Name (in use by HOMD) | Microbacterium ginsengisoli | ||
| Organism Name (as deposited) | HMT-185 Microbacterium ginsengisoli IN25 | ||
| Strain or Isolate | IN25 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium; s__Microbacterium ginsengisoli |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,931,884 (bp) | ||
| GC Percentage | 70.21 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/694/325/GCA_002694325.1_ASM269432v1 | ||
| CDS | 2806 | ||
| Genes | 2892 | ||
| mRNA | 2892 | ||
| misc RNA | 8 | ||
| rRNA | 1 | ||
| tRNA | 75 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM269432v1 |
| GenBank Assembly Accession | GCA_002694325.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN07619480 [NCBI] |
| BioProject | PRJNA391943 [NCBI] |
| Submitter | Tara Oceans Consortium |
| Submission Date | 2017-09-07T19:36:11.310 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | NZLX01 |
| NCBI TaxID | 51671 |
| Isolation Source | Indian Monsoon Gyres Province |
| Geo Location | Indian Ocean |
