Genome Meta Information: Paracoccus yeei TT13 (GCA_002749495.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002749495.1 | ||
| HOMD Taxon-ID | HMT-0104 | ||
| Species Name (in use by HOMD) | Paracoccus yeei | ||
| Organism Name (as deposited) | HMT-104 Paracoccus yeei TT13 | ||
| Strain or Isolate | TT13 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus; s__Paracoccus yeei |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 178 | ||
| Contigs |
|
||
| Total Sequence Length | 4,620,225 (bp) | ||
| GC Percentage | 67.39 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/749/495/GCA_002749495.1_ASM274949v1 | ||
| CDS | 4442 | ||
| Genes | 4536 | ||
| mRNA | 4536 | ||
| misc RNA | 29 | ||
| rRNA | 9 | ||
| tRNA | 55 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.41 % | ||
| CheckM Completeness | 99.53 % | ||
| CheckM Contamination | 0.65 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM274949v1 |
| GenBank Assembly Accession | GCA_002749495.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002749495.1 [NCBI] |
| BioSample | SAMN07501686 [NCBI] |
| BioProject | PRJNA398110 [NCBI] |
| Submitter | Changwon National University |
| Submission Date | 2017-08-12T01:35:10.816 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 147645 |
| Isolation Source | skin swab |
| Geo Location | South Korea: Changwon |
