Genome Meta Information: Patescibacteria [C1 O1 F1 G1] bacterium HMT-871 HOT-871 (GCA_002761215.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002761215.1 | ||
| HOMD Taxon-ID | HMT-0871 | ||
| Species Name (in use by HOMD) | Patescibacteria [C1 O1 F1 G1] bacterium HMT-871 | ||
| Organism Name (as deposited) | HMT-871 Patescibacteria [C1 O1 F1 G1] bacterium HMT-871 HOT-871 | ||
| Strain or Isolate | HOT-871 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Patescibacteriota;c__JAEDAM01;o__BD1-5;f__UBA6164;g__GN02-872; s__GN02-872 sp002761215 |
||
| Sequencing Technology | Illumina HiSeq; Illumina MiSeq | ||
| Genome Coverage | 500 | ||
| Contigs |
|
||
| Total Sequence Length | 1,184,529 (bp) | ||
| GC Percentage | 25.07 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/761/215/GCA_002761215.1_ASM276121v1 | ||
| CDS | 1313 | ||
| Genes | 1354 | ||
| mRNA | 1354 | ||
| misc RNA | 1 | ||
| rRNA | 6 | ||
| tRNA | 34 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM276121v1 |
| GenBank Assembly Accession | GCA_002761215.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002761215.1 [NCBI] |
| BioSample | SAMN05914505 [NCBI] |
| BioProject | PRJNA348708 [NCBI] |
| Submitter | Oak Ridge National Laboratory |
| Submission Date | 2016-10-17T10:29:03.140 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1540872 |
| Isolation Source | |
| Geo Location | USA: Oak Ridge |
