Genome Meta Information: Bifidobacterium breve DRBB27 (GCA_002838445.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002838445.1 | ||
| HOMD Taxon-ID | HMT-0889 | ||
| Species Name (in use by HOMD) | Bifidobacterium breve | ||
| Organism Name (as deposited) | HMT-889 Bifidobacterium breve DRBB27 | ||
| Strain or Isolate | DRBB27 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium; s__Bifidobacterium breve |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 349 | ||
| Contigs |
|
||
| Total Sequence Length | 2,435,083 (bp) | ||
| GC Percentage | 58.89 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/838/445/GCA_002838445.1_ASM283844v1 | ||
| CDS | 2135 | ||
| Genes | 2208 | ||
| mRNA | 2208 | ||
| misc RNA | 12 | ||
| rRNA | 4 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.52 % | ||
| CheckM Completeness | 99.18 % | ||
| CheckM Contamination | 3.67 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM283844v1 |
| GenBank Assembly Accession | GCA_002838445.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002838445.1 [NCBI] |
| BioSample | SAMN06827975 [NCBI] |
| BioProject | PRJNA384073 [NCBI] |
| Submitter | University College Cork |
| Submission Date | 2017-04-24T17:52:02.680 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1685 |
| Isolation Source | infant |
| Geo Location | Netherlands |
