Genome Meta Information: Anaerococcus octavius UMB0119 (GCA_002847745.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002847745.1 | ||
| HOMD Taxon-ID | HMT-0017 | ||
| Species Name (in use by HOMD) | Anaerococcus octavius | ||
| Organism Name (as deposited) | HMT-017 Anaerococcus octavius UMB0119 | ||
| Strain or Isolate | UMB0119 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus; s__Anaerococcus octavius |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 167.11 | ||
| Contigs |
|
||
| Total Sequence Length | 1,979,036 (bp) | ||
| GC Percentage | 30.7 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/847/745/GCA_002847745.1_ASM284774v1 | ||
| CDS | 1845 | ||
| Genes | 1925 | ||
| mRNA | 1925 | ||
| misc RNA | 29 | ||
| rRNA | 5 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.36 % | ||
| CheckM Completeness | 96.26 % | ||
| CheckM Contamination | 4.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM284774v1 |
| GenBank Assembly Accession | GCA_002847745.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002847745.1 [NCBI] |
| BioSample | SAMN08193644 [NCBI] |
| BioProject | PRJNA316969 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2017-12-16T21:05:04.735 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | PKGS01 |
| NCBI TaxID | 54007 |
| Isolation Source | |
| Geo Location | USA: Maywood, IL |
