Genome Meta Information: Neisseria flava UMB0321 (GCA_002863285.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002863285.1 | ||
| HOMD Taxon-ID | HMT-0609 | ||
| Species Name (in use by HOMD) | Neisseria flava | ||
| Organism Name (as deposited) | HMT-609 Neisseria flava UMB0321 | ||
| Strain or Isolate | UMB0321 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria flava |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 379.99 | ||
| Contigs |
|
||
| Total Sequence Length | 2,466,093 (bp) | ||
| GC Percentage | 51.16 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/863/285/GCA_002863285.1_ASM286328v1 | ||
| CDS | 2235 | ||
| Genes | 2309 | ||
| mRNA | 2309 | ||
| misc RNA | 17 | ||
| rRNA | 3 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.74 % | ||
| CheckM Completeness | 99.37 % | ||
| CheckM Contamination | 0.2 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM286328v1 |
| GenBank Assembly Accession | GCA_002863285.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002863285.1 [NCBI] |
| BioSample | SAMN08193710 [NCBI] |
| BioProject | PRJNA316969 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2017-12-16T21:05:05.863 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | PKJO01 |
| NCBI TaxID | 490 |
| Isolation Source | |
| Geo Location | USA: Maywood, IL |
