Genome Meta Information: Hoylesella buccalis UMB0536 (GCA_002884635.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002884635.1 | ||
| HOMD Taxon-ID | HMT-0562 | ||
| Species Name (in use by HOMD) | Hoylesella buccalis | ||
| Organism Name (as deposited) | HMT-562 Hoylesella buccalis UMB0536 | ||
| Strain or Isolate | UMB0536 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella sp902465605 |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 349.46 | ||
| Contigs |
|
||
| Total Sequence Length | 3,231,435 (bp) | ||
| GC Percentage | 45.35 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/884/635/GCA_002884635.1_ASM288463v1 | ||
| CDS | 2782 | ||
| Genes | 2870 | ||
| mRNA | 2870 | ||
| misc RNA | 25 | ||
| rRNA | 9 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.33 % | ||
| CheckM Completeness | 98.88 % | ||
| CheckM Contamination | 0.34 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM288463v1 |
| GenBank Assembly Accession | GCA_002884635.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002884635.1 [NCBI] |
| BioSample | SAMN07511427 [NCBI] |
| BioProject | PRJNA316969 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2017-08-16T12:32:05.540 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | PNGJ01 |
| NCBI TaxID | 28127 |
| Isolation Source | catheter |
| Geo Location | USA: Maywood, IL |
