Genome Meta Information: Staphylococcus epidermidis NCTC 11047 (GCA_002901875.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002901875.1 | ||
| HOMD Taxon-ID | HMT-0601 | ||
| Species Name (in use by HOMD) | Staphylococcus epidermidis | ||
| Organism Name (as deposited) | HMT-601 Staphylococcus epidermidis NCTC 11047 | ||
| Strain or Isolate | NCTC 11047 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus epidermidis |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 38.72 | ||
| Contigs |
|
||
| Total Sequence Length | 2,442,385 (bp) | ||
| GC Percentage | 32.07 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/901/875/GCA_002901875.1_ASM290187v1 | ||
| CDS | 2238 | ||
| Genes | 2368 | ||
| mRNA | 2368 | ||
| misc RNA | 72 | ||
| rRNA | 4 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.93 % | ||
| CheckM Completeness | 99.56 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM290187v1 |
| GenBank Assembly Accession | GCA_002901875.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002901875.1 [NCBI] |
| BioSample | SAMN05978027 [NCBI] |
| BioProject | PRJNA339206 [NCBI] |
| Submitter | Modernising Medical Microbiology |
| Submission Date | 2016-11-03T12:57:50.453 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | PPQG01 |
| NCBI TaxID | 1282 |
| Isolation Source | Nose |
| Geo Location | United Kingdom: London |
