Genome Meta Information: Staphylococcus auricularis NCTC 12101 (GCA_002902455.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002902455.1 | ||
| HOMD Taxon-ID | HMT-0331 | ||
| Species Name (in use by HOMD) | Staphylococcus auricularis | ||
| Organism Name (as deposited) | HMT-331 Staphylococcus auricularis NCTC 12101 | ||
| Strain or Isolate | NCTC 12101 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus auricularis |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 38.94 | ||
| Contigs |
|
||
| Total Sequence Length | 2,201,622 (bp) | ||
| GC Percentage | 37.26 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/902/455/GCA_002902455.1_ASM290245v1 | ||
| CDS | 2090 | ||
| Genes | 2203 | ||
| mRNA | 2203 | ||
| misc RNA | 42 | ||
| rRNA | 10 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 95.67 % | ||
| CheckM Contamination | 1.36 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM290245v1 |
| GenBank Assembly Accession | GCA_002902455.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002902455.1 [NCBI] |
| BioSample | SAMN05978007 [NCBI] |
| BioProject | PRJNA339206 [NCBI] |
| Submitter | Modernising Medical Microbiology |
| Submission Date | 2016-11-03T12:57:30.340 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | PPQW01 |
| NCBI TaxID | 29379 |
| Isolation Source | external ear |
| Geo Location | United Kingdom: London |
