Genome Meta Information: Simonsiella muelleri ATCC 29453 (GCA_002951835.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002951835.1 | ||
| HOMD Taxon-ID | HMT-0683 | ||
| Species Name (in use by HOMD) | Simonsiella muelleri | ||
| Organism Name (as deposited) | HMT-683 Simonsiella muelleri ATCC 29453 | ||
| Strain or Isolate | ATCC 29453 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Simonsiella; s__Simonsiella muelleri |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 300 | ||
| Contigs |
|
||
| Total Sequence Length | 2,469,862 (bp) | ||
| GC Percentage | 41.53 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/951/835/GCA_002951835.1_ASM295183v1 | ||
| CDS | 2385 | ||
| Genes | 2476 | ||
| mRNA | 2476 | ||
| misc RNA | 17 | ||
| rRNA | 15 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 95.59 % | ||
| CheckM Contamination | 0.22 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM295183v1 |
| GenBank Assembly Accession | GCA_002951835.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002951835.1 [NCBI] |
| BioSample | SAMN06230011 [NCBI] |
| BioProject | PRJNA361301 [NCBI] |
| Submitter | INRS-Institut Armand Frappier |
| Submission Date | 2017-01-13T15:20:02.677 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 641147 |
| Isolation Source | oral cavities |
| Geo Location | missing |
