Genome Meta Information: Fastidiosipila sanguinis CCUG 47711 (GCA_002998295.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002998295.1 | ||
| HOMD Taxon-ID | HMT-0935 | ||
| Species Name (in use by HOMD) | Fastidiosipila sanguinis | ||
| Organism Name (as deposited) | HMT-935 Fastidiosipila sanguinis CCUG 47711 | ||
| Strain or Isolate | CCUG 47711 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Saccharofermentanales;f__Fastidiosipilaceae;g__Fastidiosipila; s__Fastidiosipila sanguinis |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 25.4 | ||
| Contigs |
|
||
| Total Sequence Length | 1,785,891 (bp) | ||
| GC Percentage | 33.73 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/998/295/GCA_002998295.1_ASM299829v1 | ||
| CDS | 1505 | ||
| Genes | 1576 | ||
| mRNA | 1576 | ||
| misc RNA | 22 | ||
| rRNA | 6 | ||
| tRNA | 42 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 75.98 % | ||
| CheckM Contamination | 0.7 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM299829v1 |
| GenBank Assembly Accession | GCA_002998295.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002998295.1 [NCBI] |
| BioSample | SAMN08567288 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2018-02-20T09:48:04.960 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 236753 |
| Isolation Source | |
| Geo Location | Sweden: Karlstad |
