Genome Meta Information: Bacteroides heparinolyticus F0111 (GCA_002998535.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002998535.1 | ||
| HOMD Taxon-ID | HMT-0630 | ||
| Species Name (in use by HOMD) | Bacteroides heparinolyticus | ||
| Organism Name (as deposited) | HMT-630 Bacteroides heparinolyticus F0111 | ||
| Strain or Isolate | F0111 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides; s__Bacteroides heparinolyticus |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 230 | ||
| Contigs |
|
||
| Total Sequence Length | 3,608,975 (bp) | ||
| GC Percentage | 47.25 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/998/535/GCA_002998535.1_ASM299853v1 | ||
| CDS | 2873 | ||
| Genes | 2991 | ||
| mRNA | 2991 | ||
| misc RNA | 41 | ||
| rRNA | 12 | ||
| tRNA | 64 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.6 % | ||
| CheckM Completeness | 98.58 % | ||
| CheckM Contamination | 2.74 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM299853v1 |
| GenBank Assembly Accession | GCA_002998535.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002998535.1 [NCBI] |
| BioSample | SAMN08439035 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2018-01-30T17:19:05.126 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 28113 |
| Isolation Source | 14 mesial subgingival |
| Geo Location | USA: Blacksberg, VA |
