Genome Meta Information: Staphylococcus auricularis SNUC 3034 (GCA_003040695.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003040695.1 | ||
| HOMD Taxon-ID | HMT-0331 | ||
| Species Name (in use by HOMD) | Staphylococcus auricularis | ||
| Organism Name (as deposited) | HMT-331 Staphylococcus auricularis SNUC 3034 | ||
| Strain or Isolate | SNUC 3034 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus auricularis |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 56 | ||
| Contigs |
|
||
| Total Sequence Length | 2,283,589 (bp) | ||
| GC Percentage | 37.13 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/040/695/GCA_003040695.1_ASM304069v1 | ||
| CDS | 2129 | ||
| Genes | 2234 | ||
| mRNA | 2234 | ||
| misc RNA | 37 | ||
| rRNA | 9 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.72 % | ||
| CheckM Completeness | 96.29 % | ||
| CheckM Contamination | 0.94 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM304069v1 |
| GenBank Assembly Accession | GCA_003040695.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003040695.1 [NCBI] |
| BioSample | SAMN06172841 [NCBI] |
| BioProject | PRJNA342349 [NCBI] |
| Submitter | University of Calgary |
| Submission Date | 2016-12-21T14:03:53.660 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | PZDH01 |
| NCBI TaxID | 29379 |
| Isolation Source | Herd 211 |
| Geo Location | Canada: Ontario |
