Genome Meta Information: Prevotella illustrans W6195 (GCA_003043925.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003043925.1 | ||
| HOMD Taxon-ID | HMT-0820 | ||
| Species Name (in use by HOMD) | Prevotella illustrans | ||
| Organism Name (as deposited) | HMT-820 Prevotella illustrans W6195 | ||
| Strain or Isolate | W6195 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella illustrans |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 194 | ||
| Contigs |
|
||
| Total Sequence Length | 3,198,654 (bp) | ||
| GC Percentage | 47.54 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/043/925/GCA_003043925.1_ASM304392v1 | ||
| CDS | 2604 | ||
| Genes | 2682 | ||
| mRNA | 2682 | ||
| misc RNA | 5 | ||
| rRNA | 15 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.44 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM304392v1 |
| GenBank Assembly Accession | GCA_003043925.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003043925.1 [NCBI] |
| BioSample | SAMN08439031 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2018-01-30T17:19:05.046 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | PYXD01 |
| NCBI TaxID | 2081962 |
| Isolation Source | Periodontal pocket |
| Geo Location | United Kingdom: London |
