Genome Meta Information: Prevotella jejuni F0648 (GCA_003043935.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003043935.1 | ||
| HOMD Taxon-ID | HMT-0313 | ||
| Species Name (in use by HOMD) | Prevotella jejuni | ||
| Organism Name (as deposited) | HMT-313 Prevotella jejuni F0648 | ||
| Strain or Isolate | F0648 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella jejuni |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 190 | ||
| Contigs |
|
||
| Total Sequence Length | 3,915,696 (bp) | ||
| GC Percentage | 41.66 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/043/935/GCA_003043935.1_ASM304393v1 | ||
| CDS | 3131 | ||
| Genes | 3203 | ||
| mRNA | 3203 | ||
| misc RNA | 9 | ||
| rRNA | 12 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.29 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM304393v1 |
| GenBank Assembly Accession | GCA_003043935.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003043935.1 [NCBI] |
| BioSample | SAMN04435865 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2016-01-22T19:16:05.000 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | PYXE01 |
| NCBI TaxID | 652722 |
| Isolation Source | attached gingivae |
| Geo Location | USA: Cambridge, MA |
